miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ancylostoma caninum



ABOUT THIS RECORD

ID: MNEST008963
species: Ancylostoma caninum
miRNA family: miR-136
source: miRNEST

Taxonomy by NCBI:
Ancylostoma caninum Ancylostoma Ancylostomatinae Ancylostomatidae Ancylostomatoidea Strongylida Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATCATCGTCTCAAATGAGTCT

miRNA*
ACTCCATTTGTTTTGATGATGG

mismatches: 3
bulges: 1

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pre-miRNA
TGTGGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTACGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATT

dot-bracket secondary structure
.((((...((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))..)))).


SIMILARITIES
miRBase oar-mir-136: 5e-46

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-136: 5e-40
most similar mature miRNAs

Identical with: ssc-mir-136 from miRBase (MNEST033988)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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